Crucible of Ideas

After returning to the ship, you see that Anne and Zaydolf are gone.

There's also a Nice who's chasing you.

When it catches you, you get teleported to a void where you encounter a Nice who asks you, "Where are you? Where are your friends? It won't matter anymore, it's too late."

After battling it, the Nice teleports you to a corrupted version of Latex Town.

If you talk to the right NPC, she tells you how you don't understand the truth of the world, and that everything is an egg.

After battling her, you see a cutscene of a man getting hit by a train.

Interacting with the blood splatter makes you fight a battle, and then you are transported to some weird forest.

There are a lot of bushes, but some of them are secretly trainers who battle you.

After getting to the door in the southeast corner, you are transported to another void where you meet Elias again.

Elias is ashamed he couldn't finish you on the sun, but he promises to strike you down.

Then he tells you his backstory.

He came from a galaxy millions of light years away, and his civilization was destroying itself until HE appeared, and Elias was chosen to "administer justice" to those who didn't want to follow HIM.

Then Elias became a knight of HIM, who harvested the souls of those who rebelled against HIM.

Elias also talks about "ascension" which will set him and the souls free.

After battling Elias in a double battle, you get transported to a Pokemon Center, where you can heal your Pokemon.

When you leave the Pokemon Center, you find yourself in a strange underwater area with a few trainers.

Going south gets you to a Nice who calls himself the Deep King, who battles you with a lot of Water-type Pokemon.

After beating him, you go to the same Pokemon Center.

This time, after healing, the nurse jumpscares you and makes you battle a Chanseychanse.

Chanseychanse is a weird corrupted Chansey who always starts the battle with God's Grace, a move which boosts its defenses and makes it immune to status and stat debuffs for 10 turns.

After beating the Chanseychanse, you are transported to a game show.

The game show is called "Who wants to be a bee!" along with you, the other two contestants are Jim and George.

You have to answer a bunch of questions that don't matter, and at the end, Jim wins, and gets turned into a bee, but then he goes insane and battles you.

Jim has a bunch of bee Pokemon, as well as a Beeabee who is a creepy bee with blades and eyes on its wings.

After beating Jim, you are teleported to a grassy field.

Getting to the bottom makes you fight a weird Pokemon known as Eyehaed, and beating it transports you to a school.

This school has 3 major rooms: the science room, the art room, and the top left room.

Going to the art room, you can interact with a Poke Ball next to a skull which opens the door to the science room.

It's a key, but you don't pick it up.

In the science room, you find an item which is the key to the janitor's closet.

You can't pick it up, and you don't hear the closet open, and the game informs you to go to the top left room.

When you enter the top left room, your visibility is decreased, and a few enemy Nices start inhabiting the school.

The doors to the art and science rooms are closed, but the path to the library is now open, and you need to go there and interact with a specific book on the ground to open the door to the art room.

Going to the art room lets you pick up the key to the science room, but you can't pick up the key to the janitor closet yet.

First, you need to interact with the anatomy statue in the science room and fight a Pokemon known as Anatomyan.

Beating Anatomyan gives you the Janitor Key, which lets you go to the janitor closet.

Inside of the janitor closet, you have to fight a Statikman, who is an old TV with wheels and claws.

Statikman then gives you a Basement Key, letting you access the basement, which is the last part of the school.

The basement is a big hallway where you have to fight a bunch of creepy trainers.

At the end of the basement, you come across a creepy face.

The face tells you that he made a deal with HIM, and then killed everyone in the school to "set them free".

He used to have a name, but now, he is nothing but a nameless demon.

You then need to battle him.

Nameless Demon has a Cryongi (who is a reference to the painting The Scream), and he also uses himself as a Pokemon.

After beating him, the nameless demon thanks you for freeing him.

He tells you that he was an outcast who hated everyone, and HE tempted him to kill everyone.

The nameless demon uses his power to set the souls of the people he killed free, and he wishes you good luck.

But after the nameless demon dies, HE appears.

HE knows you're wondering where you are and where your friends are.

Right now, he can only answer one of your questions.

You are locked away in a small fraction of HIS world which HE managed to overlap on top of reality.

HE tells you that this is the end of your journey, and that he will reveal the truth.

Your universe is an incubator world.

Everything in the universe is an egg, and HE will make those eggs hatch.

Everything in the universe will hatch, the fabric of the incubator will tear, and the hatched souls will become a singular entity.

They will ascend to HIS world, and they will become their true selves and merge with HIM.